Analysis on genetic polymorphisms of FSHβ gene in Jianghan chicken population

doi:10.14088/j.cnki.issn0439-8114.2021.23.028

HUBEI AGRICULTURAL SCIENCES ›› 2021, Vol. 60 ›› Issue (23): 127-130.doi: 10.14088/j.cnki.issn0439-8114.2021.23.028

Analysis on genetic polymorphisms of FSHβ gene in Jianghan chicken population

HUANG Tao¹, PAN Ai-luan¹, SHEN Jie¹, WU Yan¹, PU Yue-jin¹, ZHANG Hao¹, SUN Jing¹, LIANG Zhen-hua¹, DU Jin-ping¹, ZHU Chang-you², PI Jin-song¹

1. Institute of Animal Husbandry and Vetervinary,Hubei Academy of Agricultural Sciences/Hubei Innovation Center of Agricultural Science and Technology/Hubei Key Lab of Animal Embryo Technology and Molecular Breeding,Wuhan 430064,China;
2. Hubei Animal Husbandry Breeding Farm,Wuhan 434010,China

Received:2021-08-23 Online:2021-12-10 Published:2021-12-21

Abstract

Abstract: In this study, the genome-wide re-sequencing technology was applied in Jianghan chicken population for genetic variation identification, the results showed that, 35 single nucleotide polymorphisms （SNPs） and 2 indels in the β subunit gene of follicular estrogen （FSH） were found, one single-base mutation in the cds could cause glycine to serine. Combining with bioinformatics softwares, M6A modification site prediction, regulatory element prediction and miRNA targeting sequence prediction were further analyzed. It was found that 7 single-base mutations were located in the potential regulatory element sequence, and 7 single-base mutations and 1 indel were located in the potential miRNA binding sequence. Those genetic mutations may be involved in the regulation of FSHβ gene expression, and play a certain role in the genetic characteristics of Jianghan chicken.

Key words: FSHβ;, SNP, Jianhan chicken

CLC Number:

S831.2
Q754

HUANG Tao, PAN Ai-luan, SHEN Jie, WU Yan, PU Yue-jin, ZHANG Hao, SUN Jing, LIANG Zhen-hua, DU Jin-ping, ZHU Chang-you, PI Jin-song. Analysis on genetic polymorphisms of FSHβ gene in Jianghan chicken population[J]. HUBEI AGRICULTURAL SCIENCES, 2021, 60(23): 127-130.

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Analysis on genetic polymorphisms of FSHβ gene in Jianghan chicken population

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